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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST004353
species: Oryza sativa
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTCTCTCCGTCCCAAAATAT

miRNA*
 ATTTTGGGACGGAGGTAGTAG

mismatches: 1
bulges: 0
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pre-miRNA
 TCTACTATAGTACTCTCTCCGTCCCAAAATATAAGCATTTTAGCTATGAATCTGGATAACTGTGCGTTCAGATTCATAGTCCAAAGTTGTTATATTTTGG
GACGGAGGTAGTAGTTAATTGC

dot-bracket secondary structure
..........((((.(((((((((((((((((((.((.(((.(((((((((((((((........)))))))))))))))...))).)))))))))))))
)))))))).)))).........


SIMILARITIES
miRBase osa-MIR1439: 0.000006

PMRD osa-miRf10603-akr: 0.0000000000001

microPC miR1439: 0.00009		UniProt no hits

RFAM MIR1122: 7e-43		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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